Re: Stuff you like to believe happened in Nolan's series
I like to think that Joker was taken into federal custody after TDK. It makes more sense than him being the only patient in Arkham. I like to think Gotham is a level of Limbo and all the characters are facets of Cobb's personality at different stages in his life.
"For he had promised her that, when she first saw Tanelorn, she would be riding upon a dragon."