Peter and Johnny have always related much better to one another than Peter and Matt. Most of Spidey's team-ups with Daredevil have resulted in clashes of ideologies, etc. with Spidey being depicted as the younger, naive, optimistic do-gooder and Daredevil as the older, hardened, pragmatist. Check out the ASM Gang War arc or the PPTSSM Sin Eater arc. Whereas, Johnny is relatively the same age as Spidey and the two end-up just having a lot of fun together, talking about girl problems, pulling silly pranks on one another, etc. Check out the Spider-man/Human Torch mini (which ends with a great scene of the FF hanging with the Parkers) as well as some of their early team-ups in ASM. Untold Tales of Spider-man #13 is a great story too with a guilt-ridden Spidey recounting a tragic event to an unseen listener who turns out to be Johnny Storm at the end. Peter relates much better to Johnny than Matt.