You know what; I'll just copy it here:
To make things simple, I'll outline some of the basic ideas for my story in point form:
- The story takes place two years following the events of Superman Returns.
- Perry White has retired and Richard is the new editor of the Daily Planet. The demanding nature of Richard's job is isolating him more and more from Lois and Jason. Lois is starting to feel uncomfortable with Richard as her boss at the Daily Planet.
- Superman has regained his public fame in the world and is currently investigating a conspiricy case in Metropolis where it is believed a rogue FBI Agent named Milton Fine is in a partnership with Morgan Edge's intergang (the reigning crime gang in Metropolis).
- Superman has forged a working friendship with Richard over the years. They often meet regularly for Superman to get inside information from Richard that he wouldnt be able to obtain as Clark Kent (regarding Milton Fine in this case).
- Superman now knows that Richard and Lois were intentionally trying to protect Jason all along by keeping the identity of his true father as a secret.
- Superman's investigations lead him to uncovering that intergang has possession of Kryptonian technology and weapons. They are building some kind of gateway.
- Supes takes on Intergang and confronts Morgan Edge. He discovers the humans are building a gateway to the Phantom Zone for whoever is supplying them with Kryptonian weapons and technology.
- FBI Agent Fine is identified to be the one supplying them and reveals to Superman that he is in fact Brainiac.
- Fine/Brainiac reveals that he transmitted information to a human contact 7 years ago that could be used to falsify Krypton's existence. When Superman travelled to Krypton, the main core of Brainiac downloaded itself into Superman's ship and then rebuilt itself on Earth upon Superman's Return. He has infiltrated the Govt and maintained a human identity ever since.
- Brainiac then reveals his origin to Superman. His program was secretly created by the Kryptonian council without Jor-El's knowledge as a weapon and tool to preserve Kryptonian hertiage. Brainiac (growing in knowledge and artificial intelligence) was eventually abadoned in space upon the planet's destruction until he was able to orchestrate Superman's arrival.
- Brainac plans to recreate Krypton on earth by eliminating the entire human race and using the stored DNA patterns in his system to begin cloning a Kryptonian civilization (as he was programmed to do). He orders Superman to begin the process by murdering Jason (as Jason's blood isnt pure Kryptonian).
- Superman refuses and Brainiac unleashes an animal creature of pure violence from the Phantom Zone; Doomsday.. on Metropolis.
- Superman fights Doomsday in a bloody battle to protect the city while the US govt discover a weapon that Agent Fine planted in the White House. It has Kryptonian text counting down and appears to be some kind of weapon that could wipe the entire population of Earth off the surface when it blows.
- Doomsday heads towards Jasons school to hunt him down. The school is attacked though Jason is safe thanks to Superman. After a bloody battle, Superman injures Doomsday severly as Doomsday escapes into the ocean. Superman's suit is ripped and torn apart.
- . Lois and Richard realize they need to get Jason out of Metropolis to safety. Clark offers that all four of them go back to his home in Smallville where they will be safe. Richard tells Jason and Lois to go while he stays behind at the Planet as many citizens begin to flood out of Metropolis after the Doomsday attack.
- The US defense dept and the President realize there is only one man who can help them deactivate this weapon with Superman now MIA (believed to be killed by Doomsday); Lex Luthor. The President coerces Luthor to help in exchange for a pardon of past crimes. Luthor agrees and reveals that concentrated Kryptonite can de-power this type of Kryptonian crystal weapon as he learned about this in the Fortress with Jor-El. Luthor begins to synthesize meteor rocks into Kryptonite using his technology and research from Superman 1.
- In Smallville, Martha meets Lois, Jason and Clark at the Kent Farm. She starts to notice how Jason reminds her of young Clark as we see some flashbacks from her prespective of Clark's childhood.
- Clark tells Martha that his Superman suit [that he got from the Fortress years ago] was torn apart. Martha then reveals that she kept the blankets that Clark was wrapped in as a baby, made from a material as strong as his suit, and can use them to try to help mend his costume.
- Lois begins to snoop around at the Kent farm looking at old photos. She is shocked to see that Clark had a highschool girlfriend and a life in Smallville. She begins to realize that there was much more to him than she thought.
- Eventually she realizes that he is Superman afterall and confronts Clark. They have an emotional discussion about why Clark had to keep this from her (reminiscent of Batman 1989 with Bruce and Vicky).
- Doomsday recovers and appears again in Metropolis as Clark reveals that he must go back to stop him. Before he flies off, Martha hands him his suit; with the cape now made of the brighter red blanket material from the ship with a yellow \S/ on the back.
- They fight as Doomsday drives Superman into the Daily Planet building and begins to tear it apart. Superman saves Jimmy, Richard and the other civilians as Doomsday continues his rampage.
- Lex places his newly made Kryptonite control key onto the explosive device and depowers it.
- Fine/Brainiac, furious at this development, sends the New Krypton landmass in space hurdling towards earth. The speed at which its travelling breaks NK apart as the first wave of meteors smash into Metropolis. Superman, in an attempt to escape Doomsday's clutches to save the city, drives Doomsday into one of the larger meteors crashing down towards Metropolis and the creature is killed on impact. Superman then takes to the skies to destroy the rest. Brainiac follows Superman into space to stop him.
- Superman eventually overpowers Brainiac and sends him and the NK landmass into the sun.
- Weeks pass as the city starts to rebuild.
- Lex, given the President's support, begins to build Lexcorp (advanced defence against future attacks). Superman confronts Lex where Lex reveals that he was the one that Brainiac transmitted to 7 years ago. Luthor was the one that placed the false evidence to drive Superman to Krypton. Lex reveals that he knows that Jason White is Superman's son and threatens harm to the boy if Superman interferes with his business. Superman is furious but realizes theres nothing he can do to stop Luthor within the law and vows to one day make him pay for his crimes.
- Lex then secretly tells Kitty that he isnt after money, but immortality and ultimate knowledge. He says he believes that only Fine was killed and the core computer of Brainiac is still intact somewhere on Earth. He intends to find it using Lexcorp's resources.
- Clark tells Lois about Luthor's threat against Jason and she comes to an important decision. She tells Richard that they need to move to Smallville, it would be the best and safest thing for Jason now that Lex is gaining power over Metropolis. Richard knows that he is needed in Metropolis, to rebuild the Daily Planet. He can't leave but painfully decides to let Lois go (thinking of Jason's best interests). Unsure of when Lois would return, Richard and Lois decide to break off the engagement.
- Richard and Lois say their goodbyes as Clark, Lois and Jason head for the plane to Kansas.
- Back in Smallville, Jason is now enrolled in a new school under the alias "Conner Kent" so Lex Luthor can't track him and begins a new life.
- The film ends with Lois and Clark deciding to tell Jason about Krypton and his heritage as Martha watches.
- Clark, now temporarily based in Smallville, as his home and work in Metropolis is gone, heads to the skies as Superman to listen for trouble and save those who need him.
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). This allows us to develop a Brainiac arc, which evolves into 
